May 19th, 2021

What's up conferences May 19<sup>th</sup> at 10h am with Dr. Karen Garrett from University of Florida and Dr. Mamadou Lamine Fall from Agriculture and Agri-Food Canada

The conference

At a time of internationalization of scientific knowledge, environmental upheaval and the COVID-19 pandemic, science and scientists have had to be inventive and resilient.

But, after one year:
How are scientists in the world today?

How did plant biology researchers adapt to the pandemy?

The third edition of the What’s Up Conference meets with two fascinating researchers to discuss their work, projects, their challenges and their reflections about the scientific world of tomorrow.


Dr. Karen Garrett
University of Florida


Dr. Mamadou Lamine Fall
Agriculture and Agri-Food Canada




O. Carisse, M. L. Fall & C. Vincent. (2017). Using a biovigilance approach for pest and disease management in Quebec vineyards. Canadian Journal of Plant Pathology, 39:4, 393-404, DOI: 10.1080/07060661.2017.1366368

C. E. Buddenhagen, J. F. Hernandez Nopsa, K. F. Andersen, J. Andrade-Piedra, G. A. Forbes, P. Kromann, S. Thomas-Sharma, P. Useche, and K. A. Garrett. Epidemic Network Analysis for Mitigation of Invasive Pathogens in Seed Systems: Potato in Ecuador. Phytopathology, 107(10). DOI: 10.1094/PHYTO-03-17-0108-FI

Tool box for working with root, tuber and banana seed systems tools4seedsystems.org/

R Poudel, A Jumpponen, D C Schlatter, T C Paulitz, B B McSpadden Gardener, L L Kinkel, K A Garrett. (2016). Microbiome Networks: A Systems Framework for Identifying Candidate Microbial Assemblages for Disease Management. Phytopathology, 106(10):1083-1096. doi: 10.1094/PHYTO-02-16-0058-FI.

Ricardo I Alcalá-Briseño, Kena Casarrubias-Castillo, Diana López-Ley, Karen A Garrett, Laura Silva-Rosales. (2020). Network Analysis of the Papaya Orchard Virome from Two Agroecological Regions of Chiapas, Mexico. mSystems, 5(1): e00423-19. doi: 10.1128/mSystems.00423-19.

K. A. Garrett. (2020). Impact network analysis and the INA R package: Decision support for regional management interventions. bioRxiv. DOI: 10.1101/2020.11.08.373621

M. Carvajal-Yepes, K. Cardwell, A. Nelson, K. A. Garrett, B. Giovani, D. G. O. Saunders, S. Kamoun, J. P. Legg, V. Verdier, J. Lessel, R. A. Neher, R. Day, P. Pardey, M. L. Gullino, A. R. Records, B. Bextine, J. E. Leach, S. Staiger, J. Tohme. (2019). A global surveillance system for crop diseases. Science, 364(6447): 1237-1239. DOI: 10.1126/science.aaw1572

Yanru Xing, John F Hernandez Nopsa, Kelsey F Andersen, Jorge L Andrade-Piedra, Fenton D Beed, Guy Blomme, Mónica Carvajal-Yepes, Danny L Coyne, Wilmer J Cuellar, Gregory A Forbes, Jan F Kreuze, Jürgen Kroschel, P Lava Kumar, James P Legg, Monica Parker, Elmar Schulte-Geldermann, Kalpana Sharma, Karen A Garrett. (2020). Global Cropland Connectivity: A Risk Factor for Invasion and Saturation by Emerging Pathogens and Pests. Bioscience, 70(9): 744-758. DOI: 10.1093/biosci/biaa067

Garrett, K. A., Andersen, K. F., Asche, F., Bowden, R. L., Forbes, G. A., Kulakow, P. A., & Zhou, B. (2017). Resistance genes in global crop breeding networks. Phytopathology, 107(10): 1268-1278. https://doi.org/10.1094/PHYTO-03-17-0082-FI

Garrett, K.A., Alcalá-Briseño, R.I., Andersen, K.F., Brawner, J., Choudhury, R.A., Delaquis, E., Fayette, J., Poudel, R., Purves, D., Rothschild, J. and Small, I.M., (2020). Effective altruism as an ethical lens on research priorities. Phytopathology, 110(4): 708-722. 10.1094/PHYTO-05-19-0168-RVW

Armijo, G., Schlechter, R., Agurto, M., Muñoz, D., Nuñez, C., & Arce-Johnson, P. (2016). Grapevine pathogenic microorganisms: understanding infection strategies and host response scenarios. Frontiers in plant science, 7, 382. doi: 10.3389/fpls.2016.00382

Fall, Mamadou L., Dong Xu, Pierre Lemoyne, Issam E. Ben Moussa, Carole Beaulieu, and Odile Carisse. (2020). A Diverse Virome of Leafroll-Infected Grapevine Unveiled by dsRNA Sequencing. Viruses, 12(10): 1142. doi: 10.3390/v12101142

Ben Moussa, I., Lemoyne, P. and Fall, M., 2019. Virus et vigne, un mariage difficile à défaire: la biovigilance est nécessaire plus que jamais. Phytoprotection, 99(1), pp.15-20. doi: 10.7202/1059305ar

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December 8th, 2020

What's up conferences December 8<sup>th</sup> at 9h30 am with Dr. Eddy L. Ngonkeu from Université de Yaoundé and Dr. Tanya Arseneault from Agriculture and Agri-Food Canada

The conference

At a time of internationalization of scientific knowledge, environmental upheaval and the COVID-19 pandemic, science and scientists have had to be inventive and resilient.

But…
How are scientists in the world today?

Have Canadian researchers approached these issues differently than other researchers around the world?
Has the pandemic enriched their scientific perspectives?

The second edition of the What’s Up Conference meets with two fascinating researchers to discuss their work, projects, their challenges and their reflections about the scientific world of tomorrow.


Dr. Eddy L. Ngonkeu
Université de Yaoundé


Dr. Tanya Arseneault
Agriculture and Agri-Food Canada


Extra questions from the audience

  • Question: Hello Dr. Arseneault, you talked about your work on the study of the interaction of microorganisms in soil. Have you ever observed positive interactions? If so, which ones?

  • Dr. Arseneault: The project I presented was halfway to completion when the laboratory closures, due to the pandemic, took place. Given the large quantity of soil samples (several hundred per summer) we have not yet completed the sequencing but have isolated almost all the necessary DNA. Interaction analyses are still to come!

  • Question: Professor Ngonkeu seems to have a very applied approach to his research as well as direct contact with farmers in his country. I imagine that Agriculture and Agri-Food Canada has a program to apply the results of your research to agricultural crops in Quebec. Do you know how this process is set up? How involved are Agriculture and Agri-Food Canada researchers in this process?

  • Dr. Arseneault: We have an entire department with employees dedicated to knowledge and technology transfer who work with researchers developing marketable technologies. We also have an intellectual property office to manage the sharing of new knowledge and development and to ensure that it progresses in the best interests of Canadians. I invite you to visit the following site for more information: https://www.agr.gc.ca/fra/collaboration-scientifique-en-agriculture/transfert-et-licences-de-technologie-agriculture/?id=1196968351190. Researchers’ contact with producers remains a privileged link to be on the lookout for their needs and issues and most researchers maintain ongoing contact with producers, club councils, and local provincial government colleagues. Their input is crucial to the development of projects at the local level but also to determining Agriculture and Agri-Food Canada’s departmental priorities across the country.

  • Question: I would like to know how if the method of crop cultivation called “precision agriculture” takes in account the climatic parameters? If so, how is it performed? And I will also like to know if this method could be apply on high scale production. Additionally the performances of plants in nutrients uptake varies in function of the cultivars…is this also taken into account?

  • Dr. Arseneault: Precision agriculture is a vast field of research and is constantly adapting to new technologies and knowledge to better adapt agricultural practices (fertilization, water, pest control applications, etc) to a smaller scale and reduce as much as possible the “one size fits all” approach. It can take into account a large amount of information depending the available equipment and models developed, and yes it varies greatly depending on the crop being grown, the climactic zone and soil type. I encourage you to read the publications in the journal Precision Agriculture for more detailed information on what is currently being studied in this field of research: https://www.springer.com/journal/11119. There is also an International Society of Precision Agriculture.

  • Question: I would like to know what are the five types of biofertilizers used in Cameroon please? 

  • Dr. Eddy Ngonkeu: So we have developed biofertilizers to cope with different production constraints. Biotic and abiotic constraints: biopestices, biofertilizers in acidic soils, biofertilizers in non-acidic soils, biofertilizers in saline soils, biofertilizers in arid areas, biofertilizers in rich soils (volcanic), biofertilizers in aquatic environments (e.g. irrigated rice), etc.

  • Question: Today we ask ourselves enough questions about African strategies for managing COVID-19. You have presented some work on the management of COVID. What are these strategies? 

  • Dr. Eddy Ngonkeu:

    • The fight against the coronavirus pandemic is being fought on several fronts at the level of agricultural research: on the food level and also on the medicinal level. Cameroonian agricultural research has benefited from the special solidarity fund for the fight against the coronavirus in order to carry out three major activities including:
      • Use of traditional medicinal plant extracts for the control of ruminant intestinal parasites and diseases/pests of plants and agricultural products. Objective: to make available in an accessible way proteins of quality in sufficient quantity to the populations.
      • Production of pre-basic seeds of priority food crops for strengthening food and nutritional self-sufficiency;
      • Enhanced fish and monogastric production.
    • The human immune system is able to get rid of Corona Virus unlike HIV. By working around the immune system, simple and effective control strategies can be developed if the vaccine is not manufactured in Africa. These are strategies directed towards the production of biofortified foods (Turmeric, Spirulina, Ginger, organic foods without pesticides and chemical residues etc). And Traditional Pharmacopoeia for endogenous solutions.
    • The distribution of Artemisia seedlings as an endogenous measure of strong response against the most deadly endemic in Africa and especially this dreaded coronavirus pandemic. Indeed, a parallel has been observed between this malaria treatment and COVID 19. Most of the African countries that only recorded deaths two months after the current health crisis and that are lying about the hecatomb announced by the WHO in Africa have an explanation based, among others, on traditional plant-based treatments (Rwanda, Madagascar, Equatorial Guinea, Chad, Central African Republic, Sierra Leone and Uganda) among which the use of Artemisia annua. The effectiveness of such treatment has enabled the Cameroonian government to face this fight. Today, in Cameroon, very few people wear the mask. Everybody goes to mass or participates in sports gatherings without wearing the mask.
    • Add to all this the asset of Africa:
      • Demographic Shield: An essentially young population;
      • Political commitment which has been very strong in most countries;
      • Remarkable work that has been done by the health system (treating infected people, sick people, etc.);
      • Africa has some experience with the pandemic (Ebola, we have been living with HIV for 30 years, tuberculosis, and malaria).
    • We can put this to our credit in the spectacular resilience observed. All of this is due to the way we have managed the epidemics that preceded it.

  • Question: Isn’t it adequate for each given soil type or ecosystem to develop biofortifiers or biofertilizers with endogenous resources? Considering the environmental specificity of organisms or microorganisms and the cohabitation of species in an environment.

  • Dr. Eddy Ngonkeu: We produce biofertilizers specific to certain ecosystems and general biofertilizers.

  • Question: Are the AMF fungus strains used in the field as biostimulants native to each agricultural field? Aren’t there long-term ecological problems that could result from the introduction of foreign species into agrosystems? What is the sustainability of the results obtained by such an introduction in agrosystems?

  • Dr. Eddy Ngonkeu: The strains of fungi used to produce biofertilizers come from Cameroonian soils from the 5 agro-ecological zones. To our credit, more than 1200 isolates are kept in our genetic resource bank. Less than 10% of this potential is exploited to date. These are strains with broad specificity, ecological specificity and generalist strains. No ecological problems have been reported to date. The high competitiveness of the strains introduced is the simple mechanism for correcting poor soil productivity. These introduced strains are part of a self-sustaining system for sustainable production if in return no fungicide or bush fire has been applied to the environment.

  • Question: I would like to know if the cultivation method called “precision farming” takes into account climatic parameters? If so, how is it applied? And I would also like to know if this method could be applied to large-scale production. In addition, the performance of plants in terms of nutrient absorption varies according to cultivars… is this also taken into account?

  • Dr. Eddy Ngonkeu: No, we don’t take climatic parameters into account. The process is the same in our five agro-ecological zones, the method is suitable for large-scale production. Yes. For maize production for example, the recommended fertilizer is NPK 201010 or others. According to this method, the chemical and physical characteristics of the soil are taken into account to balance the amount of each nutrient. For this, a technical bulletin is available for each speculation.

  • Question: To guarantee food security (sufficiency and safety), mass production is necessary. How does the research conducted by your research unit relate to other agricultural challenges we have in Cameroon such as insufficient irrigation. What are your synergies between the different units necessary for sustainable agricultural development?

  • Dr. Eddy Ngonkeu: The value of the agricultural chain is the weak point of our research unit. We only control seed production and small-scale production. 98% of our small farmers did not have irrigation, processing, small-scale mechanization, drying, storage or marking systems. If these aspects are not available, sustainable agriculture does not exist.

  • Question: I have a small problem with the statement “agro-industry is killing by leaps and bounds”. Without agro-industry, how do you conserve your different crops then?

  • Dr. Eddy Ngonkeu: By agro-industry I mean industrial agriculture, which means the massive use of chemical inputs for mass production. This production system has consequences for the soil microbiome. We have very recently detected more than 8 chemical residues in vegetable products, such as tomatoes. These tomatoes are good for selling (well preserved, no rot etc.), which affects our own microbiome and consequently affects our health. You know, life makes the soil and the soil makes life. My sad expression is to no longer say “bon appétit” at the table, but “good luck” in this production context.

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August 25th 2020

What's up conferences August 25<sup>th</sup> at 9h am with Dr. Leena Tripathi from IITA Kenya and Dr. Isabelle Laforest-Lapointe from University of Sherbrooke Canada

The conference

How pandemic impacted science?
Have canadian researchers faced the same challenge as other researchers around the world?
How Covid-19 modified research habits?

The Centre SÈVE’s International Partnership Committee (CSIPC) offer you to join to the reflexion with researchers:


Dr. Leena Tripathi from IITA Kenya
Dr Leena Tripathi
International Institute of Tropical Agriculture, Kenya


Dr. Isabelle Laforest-Lapointe from University of Sherbrooke Canada
Dr Isabelle Laforest-Lapointe
Université de Sherbrooke, Canada


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